Research Article | Open Access
VIRTUAL SCREENING TO IDENTIFY PROTEIN TARGETS IN AGGREGATIBACTER ACTINOMYCETEMCOMITANS INTERACTING WITH CAFFEINE.
Dr. Parkavi. A, Dr.J.Vijayashree Priyadharsini Dr. Parkavi. A Haripriya R,
Pages: 1-13
Abstract
INTRODUCTION
Aggregatibacter actinomycetemcomitans is a perio-pathogenic bacteria that has long been
associated with severe periodontitis. The mechanisms of its pathogenicity have been studied in
humans and pre-clinical experimental models. The aim of the present study was to identify the
protein targets in Aggregatibacter actinomycetemcomitans interacting with caffeine through
virtual screening.
MATERIALS AND METHODS
Computational tools were used to identify the targets, assess its functional role and virulence
property. The STITCH tool was used for identifying the proteins of A.actinomycetemcomitans
interacting with caffeine. Further, the peptide epitopes present in the virulence factors were
identified using the BepiPred tool.
RESULTS
Multiple proteins of A. actinomycetamcomitans were found to interact with caffeine, of which only
thiol disulphide interchange protein was identified as a virulence factor. Several epitopes have
been identified in the protein. The
CONCLUSION
The present in silico study provides preliminary data on the protein targets and its virulence factor
of Aggregatibacter actinomycetemcomitans interacting with caffeine.
Keywords
Caffeine, virulence factor, Aggregatibacter actinomycetamcomitans,periodontitis, protein target, Innovative technique